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The test messes a bit with the ESP, which might cause bootctl status output to change.
Run the test that simply checks status without changing anything first.
[ 188.633908] TEST-87-AUX-UTILS-VM.sh[1101]: + bootctl status --quiet
[ 188.681082] TEST-87-AUX-UTILS-VM.sh[1155]: System:
[ 188.681082] TEST-87-AUX-UTILS-VM.sh[1155]: Firmware: UEFI 2.70 (EDK II 1.00)
[ 188.681082] TEST-87-AUX-UTILS-VM.sh[1155]: Firmware Arch: x64
[ 188.681082] TEST-87-AUX-UTILS-VM.sh[1155]: Secure Boot: enabled (user)
<...>
[ 198.938717] TEST-87-AUX-UTILS-VM.sh[1679]: ++ printf '\6\0\0\0\1'
[ 198.939235] TEST-87-AUX-UTILS-VM.sh[1678]: + cmp /sys/firmware/efi/efivars/SecureBoot-8be4df61-93ca-11d2-aa0d-00e098032b8c /dev/fd/63
[ 198.944957] TEST-87-AUX-UTILS-VM.sh[1678]: + cmp /sys/firmware/efi/efivars/SetupMode-8be4df61-93ca-11d2-aa0d-00e098032b8c /dev/fd/63
[ 198.945808] TEST-87-AUX-UTILS-VM.sh[1681]: ++ printf '\6\0\0\0\0'
[ 198.950459] TEST-87-AUX-UTILS-VM.sh[1684]: + bootctl status
[ 198.951357] TEST-87-AUX-UTILS-VM.sh[1685]: + grep -q 'Secure Boot: enabled'
[ 199.004142] TEST-87-AUX-UTILS-VM.sh[1086]: + echo 'Subtest /usr/lib/systemd/tests/testdata/units/TEST-87-AUX-UTILS-VM.bootctl.sh failed'
Follow-up for 5ae58ac2b9
Fixes https://github.com/systemd/systemd/issues/39598